BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D06SP1|AL428716
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1470 1762 0.0
>3x_Contig1470
Length = 8270
Score = 1762 bits (889), Expect = 0.0
Identities = 896/897 (99%), Gaps = 1/897 (0%)
Strand = Plus / Minus
Query: 1 agtagtgttgcaccgtgccaatgcaggtggctattagattaaatatgtgatttgttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4452 agtagtgttgcaccgtgccaatgcaggtggctattagattaaatatgtgatttgttctat 4393
Query: 61 taagtttcctgtataattaatggggagcgctgattctcttttggtacgcttcccatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 taagtttcctgtataattaatggggagcgctgattctcttttggtacgcttcccatccag 4333
Query: 121 catttctgtatctttcaccttcaaccttaggatctctacccttggcgaaaagtcctctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 catttctgtatctttcaccttcaaccttaggatctctacccttggcgaaaagtcctctgc 4273
Query: 181 caacaatgatgatatctgatccaccacttacaacttcgtcgacggttctgtactgctgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4272 caacaatgatgatatctgatccaccacttacaacttcgtcgacggttctgtactgctgac 4213
Query: 241 ccaatgcatcgcctttgtcgtctaaacctacacctggggtcatgattagccaatcaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 ccaatgcatcgcctttgtcgtctaaacctacacctggggtcatgattagccaatcaaacc 4153
Query: 301 cttcttctcttcctcccatatcgttctgagcaatgaacccaataacgaaatctttatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4152 cttcttctcttcctcccatatcgttctgagcaatgaacccaataacgaaatctttatcac 4093
Query: 361 tctttgcaatatcaacggtacccttagtatattcaccgtgtgctagagaacccttggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4092 tctttgcaatatcaacggtacccttagtatattcaccgtgtgctagagaacccttggaag 4033
Query: 421 acaattcagcaagcatcaataatccccttggttctttggtgacctcttgcgcaccttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4032 acaattcagcaagcatcaataatccccttggttctttggtgacctcttgcgcaccttgtt 3973
Query: 481 tcaagccagcaacaataccagcaccagtaaccccgtgggcgttggtgatatcagaccatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3972 tcaagccagcaacaataccagcaccagtaaccccgtgggcgttggtgatatcagaccatt 3913
Query: 541 ctgcgatacggtaaacgcccgatgtatattgtaatttgactgtgttaccgatatcggcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3912 ctgcgatacggtaaacgcccgatgtatattgtaatttgactgtgttaccgatatcggcga 3853
Query: 601 attttctgtcctcaaatatcaagaacttgtatttctctgccaatgctttcaatggaacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3852 attttctgtcctcaaatatcaagaacttgtatttctctgccaatgctttcaatggaacga 3793
Query: 661 cagtaccctcataactgaaatcatccaagatatcaacgtgtgttttcaaaaggcaaatgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3792 cagtaccctcataactgaaatcatccaagatatcaacgtgtgttttcaaaaggcaaatgt 3733
Query: 721 atggacccaacgtttcaacaagtttcaatagctcatcagtcgaacgaacgtcaagagaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3732 atggacccaacgtttcaacaagtttcaatagctcatcagtcgaacgaacgtcaagagaag 3673
Query: 781 cacacaaattggtcttcttttcatccattaaacgtaaaagtttcgatgcaaccggacttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3672 cacacaaattggtcttcttttcatccattaaacgtaaaagtttcgatgcaaccggacttg 3613
Query: 841 catgagtctcagctctactggtatatgattttgtggacatggtgc-actaattgacg 896
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3612 catgagtctcagctctactggtatatgattttgtggacatggtgcaactaattgacg 3556
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6308
Number of Sequences: 1807
Number of extensions: 6308
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)